AHF63074.1 protein (Synechococcus sp. WH 8109)

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Score

AHF63074.1

Secreted protein MPB70 precursor-like protein. (575 aa)

Predicted Functional Partners:

AHF64560.1

0.942

rpl2

0.904

rpl13

0.894

rpl23

0.891

rpl24

0.890

rpl6

0.887

rplK

0.885

rpl3

0.883

rpl18

0.882

rpl10

0.882

Your Current Organism:

Synechococcus sp. WH 8109

NCBI taxonomy Id: 166314
Other names: S. sp. WH 8109, Synechococcus sp. WH8109

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AHF63074.1	AHF64560.1	Syncc8109_0690	Syncc8109_2233	Secreted protein MPB70 precursor-like protein.	RNA-binding S4.	0.942
AHF63074.1	rpl10	Syncc8109_0690	Syncc8109_2578	Secreted protein MPB70 precursor-like protein.	50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.	0.882
AHF63074.1	rpl13	Syncc8109_0690	Syncc8109_0354	Secreted protein MPB70 precursor-like protein.	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.894
AHF63074.1	rpl18	Syncc8109_0690	Syncc8109_0365	Secreted protein MPB70 precursor-like protein.	Ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.	0.882
AHF63074.1	rpl2	Syncc8109_0690	Syncc8109_0377	Secreted protein MPB70 precursor-like protein.	50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	0.904
AHF63074.1	rpl23	Syncc8109_0690	Syncc8109_0378	Secreted protein MPB70 precursor-like protein.	50S ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.	0.891
AHF63074.1	rpl24	Syncc8109_0690	Syncc8109_0369	Secreted protein MPB70 precursor-like protein.	LSU ribosomal protein L24P; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.	0.890
AHF63074.1	rpl3	Syncc8109_0690	Syncc8109_0380	Secreted protein MPB70 precursor-like protein.	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	0.883
AHF63074.1	rpl6	Syncc8109_0690	Syncc8109_0366	Secreted protein MPB70 precursor-like protein.	50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.	0.887
AHF63074.1	rplK	Syncc8109_0690	Syncc8109_2581	Secreted protein MPB70 precursor-like protein.	Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.	0.885
AHF64560.1	AHF63074.1	Syncc8109_2233	Syncc8109_0690	RNA-binding S4.	Secreted protein MPB70 precursor-like protein.	0.942
AHF64560.1	rpl13	Syncc8109_2233	Syncc8109_0354	RNA-binding S4.	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.767
AHF64560.1	rpl18	Syncc8109_2233	Syncc8109_0365	RNA-binding S4.	Ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.	0.437
AHF64560.1	rpl2	Syncc8109_2233	Syncc8109_0377	RNA-binding S4.	50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	0.765
AHF64560.1	rpl23	Syncc8109_2233	Syncc8109_0378	RNA-binding S4.	50S ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.	0.437
AHF64560.1	rpl24	Syncc8109_2233	Syncc8109_0369	RNA-binding S4.	LSU ribosomal protein L24P; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.	0.765
AHF64560.1	rpl3	Syncc8109_2233	Syncc8109_0380	RNA-binding S4.	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	0.770
AHF64560.1	rpl6	Syncc8109_2233	Syncc8109_0366	RNA-binding S4.	50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.	0.437
rpl10	AHF63074.1	Syncc8109_2578	Syncc8109_0690	50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.	Secreted protein MPB70 precursor-like protein.	0.882
rpl10	rpl13	Syncc8109_2578	Syncc8109_0354	50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.994