STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHF63099.1Putative phosphoribosyltransferase family protein. (130 aa)    
Predicted Functional Partners:
AHF63100.1
Hypothetical protein.
 
   
 0.910
AHF64546.1
Hypothetical protein.
  
     0.577
AHF63098.1
Hypothetical protein.
       0.564
AHF64200.1
Hypothetical protein.
  
     0.548
AHF63251.1
Hypothetical protein.
  
     0.524
AHF64210.1
Hypothetical protein.
  
     0.522
AHF64227.1
Hypothetical protein.
  
     0.520
AHF64005.1
Hypothetical protein.
  
     0.512
AHF63568.1
Hypothetical protein.
  
     0.493
abrB
Transcriptional regulator AbrB.
  
     0.482
Your Current Organism:
Synechococcus sp. WH 8109
NCBI taxonomy Id: 166314
Other names: S. sp. WH 8109, Synechococcus sp. WH8109
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.