Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AHF62702.1 | AHF63106.1 | Syncc8109_0292 | Syncc8109_0726 | DNA-3-methyladenine glycosylase; Belongs to the DNA glycosylase MPG family. | Exodeoxyribonuclease III. | 0.598 |
| AHF63106.1 | AHF62702.1 | Syncc8109_0726 | Syncc8109_0292 | Exodeoxyribonuclease III. | DNA-3-methyladenine glycosylase; Belongs to the DNA glycosylase MPG family. | 0.598 |
| AHF63106.1 | AHF63107.1 | Syncc8109_0726 | Syncc8109_0727 | Exodeoxyribonuclease III. | Hypothetical protein. | 0.571 |
| AHF63106.1 | AHF63576.1 | Syncc8109_0726 | Syncc8109_1206 | Exodeoxyribonuclease III. | Putative ATP-dependent DNA ligase. | 0.857 |
| AHF63106.1 | AHF64423.1 | Syncc8109_0726 | Syncc8109_2085 | Exodeoxyribonuclease III. | Pseudouridine synthase, Rsu; Belongs to the pseudouridine synthase RsuA family. | 0.690 |
| AHF63106.1 | dnaN | Syncc8109_0726 | Syncc8109_0001 | Exodeoxyribonuclease III. | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.856 |
| AHF63106.1 | holB | Syncc8109_0726 | Syncc8109_2488 | Exodeoxyribonuclease III. | DNA polymerase III, delta prime subunit. | 0.642 |
| AHF63106.1 | mutY | Syncc8109_0726 | Syncc8109_0122 | Exodeoxyribonuclease III. | Mutator mutT protein. | 0.811 |
| AHF63106.1 | nth | Syncc8109_0726 | Syncc8109_1172 | Exodeoxyribonuclease III. | Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. | 0.894 |
| AHF63106.1 | polA | Syncc8109_0726 | Syncc8109_2065 | Exodeoxyribonuclease III. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.935 |
| AHF63106.1 | rsuA | Syncc8109_0726 | Syncc8109_1011 | Exodeoxyribonuclease III. | Pseudouridine synthase, Rsu; Belongs to the pseudouridine synthase RsuA family. | 0.690 |
| AHF63107.1 | AHF63106.1 | Syncc8109_0727 | Syncc8109_0726 | Hypothetical protein. | Exodeoxyribonuclease III. | 0.571 |
| AHF63576.1 | AHF63106.1 | Syncc8109_1206 | Syncc8109_0726 | Putative ATP-dependent DNA ligase. | Exodeoxyribonuclease III. | 0.857 |
| AHF63576.1 | dnaN | Syncc8109_1206 | Syncc8109_0001 | Putative ATP-dependent DNA ligase. | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.988 |
| AHF63576.1 | holB | Syncc8109_1206 | Syncc8109_2488 | Putative ATP-dependent DNA ligase. | DNA polymerase III, delta prime subunit. | 0.807 |
| AHF63576.1 | polA | Syncc8109_1206 | Syncc8109_2065 | Putative ATP-dependent DNA ligase. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.947 |
| AHF64423.1 | AHF63106.1 | Syncc8109_2085 | Syncc8109_0726 | Pseudouridine synthase, Rsu; Belongs to the pseudouridine synthase RsuA family. | Exodeoxyribonuclease III. | 0.690 |
| dnaN | AHF63106.1 | Syncc8109_0001 | Syncc8109_0726 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | Exodeoxyribonuclease III. | 0.856 |
| dnaN | AHF63576.1 | Syncc8109_0001 | Syncc8109_1206 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | Putative ATP-dependent DNA ligase. | 0.988 |
| dnaN | holB | Syncc8109_0001 | Syncc8109_2488 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | DNA polymerase III, delta prime subunit. | 0.998 |
page 1 of 2