STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
futBPutative iron ABC transporter. (564 aa)    
Predicted Functional Partners:
futC
ATPase; Belongs to the ABC transporter superfamily.
 
 0.998
AHF63428.1
ABC-type Fe3+ transport system periplasmic component.
 
 
 0.992
AHF63806.1
ATPase.
     
  0.760
AHF63549.1
ATPase.
     
  0.710
ccsA
Putative heme transporter; Required during biogenesis of c-type cytochromes (cytochrome c6 and cytochrome f) at the step of heme attachment.
     
  0.710
AHF63805.1
Putative permease.
     
  0.691
drrB
Putative multidrug efflux ABC transporter.
     
  0.607
AHF63396.1
ABC transporter component, possibly Mn transport.
     
 0.607
AHF63546.1
ABC transporter component, possibly Mn transport.
     
 0.607
AHF63620.1
ATPase; Belongs to the ABC transporter superfamily.
 
  
 0.585
Your Current Organism:
Synechococcus sp. WH 8109
NCBI taxonomy Id: 166314
Other names: S. sp. WH 8109, Synechococcus sp. WH8109
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.