Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AHF63133.1Hypothetical protein. (180 aa)    
Predicted Functional Partners:
AHF63131.1
Hypothetical protein.
 
     0.888
argB
Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily.
       0.811
AHF63795.1
Hypothetical protein.
  
     0.758
AHF63843.1
Hypothetical protein.
  
     0.756
AHF63110.1
Hypothetical protein.
  
     0.738
AHF63618.1
Hypothetical protein.
  
     0.736
AHF63022.1
Hypothetical protein.
  
   
 0.726
AHF63908.1
Hypothetical protein.
  
     0.725
AHF65052.1
Hypothetical protein.
  
     0.722
AHF64481.1
Putative 3Fe-4S ferredoxin.
  
     0.718
Your Current Organism:
Synechococcus sp. WH 8109
NCBI taxonomy Id: 166314
Other names: S. sp. WH 8109, Synechococcus sp. WH8109
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