STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHF63187.1Hypothetical protein. (188 aa)    
Predicted Functional Partners:
AHF63186.1
Hypothetical protein.
 
     0.921
hflX
Putative GTP-binding protein, transporter associated; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis.
  
 0.822
txlA
Thioredoxin-like protein TxlA.
  
 
 0.819
nusA
NusA antitermination factor; Participates in both transcription termination and antitermination.
  
 
   0.817
AHF64420.1
Thioredoxin reductase.
  
 
 0.799
tpx
Thioredoxin peroxidase.
  
 0.790
AHF62816.1
Hypothetical protein.
  
 
 0.786
gshR
Putative glutathione reductase (NADPH).
   
 0.786
lpdA
Putative dihydrolipoamide dehydrogenase.
   
 0.786
msrA
Peptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
   
 0.782
Your Current Organism:
Synechococcus sp. WH 8109
NCBI taxonomy Id: 166314
Other names: S. sp. WH 8109, Synechococcus sp. WH8109
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.