STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
arsRPutative transcriptional regulator, ArsR family. (105 aa)    
Predicted Functional Partners:
AHF63210.1
Hypothetical protein.
  
  
 0.778
gap3
Glyceraldehyde-3-phosphate dehydrogenase, type I; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
     
 0.615
AHF63213.1
Multidrug efflux transporter, MFS family.
     
 0.606
mscS
Small mechanosensitive ion channel, MscS family.
       0.584
AHF64420.1
Thioredoxin reductase.
  
  
 0.516
AHF64797.1
Heavy metal translocating P-type ATPase.
  
  
 0.516
AHF63214.1
Hypothetical protein.
       0.429
AHF65044.1
Putative chloride channel.
     
 0.422
AHF62514.1
Putative multidrug efflux ABC transporter.
  
  
 0.410
AHF63929.1
Putative arsenite transporter, ACR3 family.
  
  
 0.408
Your Current Organism:
Synechococcus sp. WH 8109
NCBI taxonomy Id: 166314
Other names: S. sp. WH 8109, Synechococcus sp. WH8109
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.