STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHF63241.1Hypothetical protein. (221 aa)    
Predicted Functional Partners:
alsT
Amino acid carrier protein.
       0.773
AHF63243.1
Hypothetical protein.
 
     0.768
AHF64024.1
Hypothetical protein.
  
     0.744
AHF63260.1
Hypothetical protein.
  
     0.718
AHF63610.1
Hypothetical protein.
  
     0.715
AHF64877.1
Hypothetical protein.
  
     0.715
AHF62593.1
Hypothetical protein.
  
     0.709
AHF64522.1
Hypothetical protein.
  
     0.708
abrB
Transcriptional regulator AbrB.
  
     0.707
cytM
Cytochrome cM.
  
     0.696
Your Current Organism:
Synechococcus sp. WH 8109
NCBI taxonomy Id: 166314
Other names: S. sp. WH 8109, Synechococcus sp. WH8109
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.