STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AHF63247.1Putative oxidoreductase. (542 aa)    
Predicted Functional Partners:
AHF63637.1
Hypothetical protein.
    
 0.740
AHF64456.1
Hypothetical protein.
    
 0.740
AHF63832.1
Small GTP-binding protein domain protein.
     
  0.546
glsF
Glutamate synthase (NADPH).
     
 0.484
AHF63246.1
Hypothetical protein.
       0.445
AHF62631.1
Putative glycine betaine transporter, BCCT family protein; Belongs to the BCCT transporter (TC 2.A.15) family.
  
  
 0.437
AHF63245.1
Hypothetical protein.
       0.423
AHF63243.1
Hypothetical protein.
       0.413
rsfS
Iojap-related protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.
       0.413
Your Current Organism:
Synechococcus sp. WH 8109
NCBI taxonomy Id: 166314
Other names: S. sp. WH 8109, Synechococcus sp. WH8109
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.