STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHF63270.1Hypothetical protein. (376 aa)    
Predicted Functional Partners:
AHF63269.1
Hypothetical protein.
 
     0.940
AHF63268.1
Hypothetical protein.
       0.648
AHF63271.1
Hypothetical protein.
       0.596
AHF63267.1
Hypothetical protein.
       0.541
AHF63959.1
Hypothetical protein.
  
     0.535
metA
Homoserine O-succinyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine; Belongs to the MetA family.
 
     0.532
AHF62593.1
Hypothetical protein.
  
     0.506
cysD-2
O-acetylhomoserine/O-acetylserine sulfhydrylase.
       0.504
cobJ
precorrin-3B C17-methyltransferase.
  
    0.484
AHF62794.1
Hypothetical protein.
  
     0.434
Your Current Organism:
Synechococcus sp. WH 8109
NCBI taxonomy Id: 166314
Other names: S. sp. WH 8109, Synechococcus sp. WH8109
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.