STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bolABolA family protein; Belongs to the BolA/IbaG family. (82 aa)    
Predicted Functional Partners:
AHF63340.1
Glutaredoxin-related protein; Belongs to the glutaredoxin family. Monothiol subfamily.
 
 0.996
acpP
Acyl carrier protein (ACP); Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 0.784
AHF62818.1
MRP protein-like protein; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
     
 0.763
sufC
FeS assembly ATPase SufC.
     
  0.753
AHF63342.1
Hypothetical protein.
       0.686
AHF62738.1
Hypothetical protein.
   
 0.608
AHF64769.1
HesB/YadR/YfhF; Belongs to the HesB/IscA family.
   
 0.608
mesJ
Putative MesJ; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine. Belongs to the tRNA(Ile)-lysidine synthase family.
     
  0.602
AHF63343.1
Phospholipid/glycerol acyltransferase.
       0.599
nifS
Putative cysteine desulfurase (class-V aminotransferase family).
     
 0.580
Your Current Organism:
Synechococcus sp. WH 8109
NCBI taxonomy Id: 166314
Other names: S. sp. WH 8109, Synechococcus sp. WH8109
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