Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
AHF63359.1Putative Na+/H+ antiporter, CPA2 family. (717 aa)    
Predicted Functional Partners:
mdlB-2
ATPase.
   
   0.772
AHF65044.1
Putative chloride channel.
     
 0.580
AHF64420.1
Thioredoxin reductase.
  
 
 0.561
nhaP
Putative Na+/H+ antiporter, CPA1 family.
   
 
 0.551
AHF63357.1
Hypothetical protein.
       0.540
hflX
Putative GTP-binding protein, transporter associated; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis.
  
  
 0.540
AHF63997.1
Hypothetical protein.
 
     0.527
AHF63360.1
Cell envelope-related function transcriptional attenuator common domain protein.
       0.507
raiA
Putative sigma 54 modulation protein/ribosomal protein S30EA; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.
  
  
 0.495
AHF64912.1
Putative small heat shock protein; Belongs to the small heat shock protein (HSP20) family.
 
  
 0.488
Your Current Organism:
Synechococcus sp. WH 8109
NCBI taxonomy Id: 166314
Other names: S. sp. WH 8109, Synechococcus sp. WH8109
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