rimI protein (Synechococcus sp. WH 8109) - STRING interaction network

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Predicted Interactions

gene neighborhood

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textmining

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Score

rimI

Ribosomal-protein-alanine acetyltransferase. (171 aa)

Predicted Functional Partners:

dacA

0.645

lysA

0.644

uppS

0.586

BioB

0.568

clpC

0.520

guaA

0.459

Your Current Organism:

Synechococcus sp. WH 8109

NCBI taxonomy Id: 166314
Other names: S. sp. WH 8109, Synechococcus sp. WH8109

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BioB	dacA	Syncc8109_0995	Syncc8109_0997	Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family.	Hypothetical protein; Catalyzes the condensation of 2 ATP molecules into cyclic di- AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria.	0.810
BioB	lysA	Syncc8109_0995	Syncc8109_0998	Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family.	Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.	0.792
BioB	rimI	Syncc8109_0995	Syncc8109_0999	Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family.	Ribosomal-protein-alanine acetyltransferase.	0.568
BioB	uppS	Syncc8109_0995	Syncc8109_0996	Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family.	Undecaprenyl diphosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.	0.810
clpC	dacA	Syncc8109_1000	Syncc8109_0997	ATPase; Belongs to the ClpA/ClpB family.	Hypothetical protein; Catalyzes the condensation of 2 ATP molecules into cyclic di- AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria.	0.402
clpC	lysA	Syncc8109_1000	Syncc8109_0998	ATPase; Belongs to the ClpA/ClpB family.	Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.	0.429
clpC	rimI	Syncc8109_1000	Syncc8109_0999	ATPase; Belongs to the ClpA/ClpB family.	Ribosomal-protein-alanine acetyltransferase.	0.520
clpC	uppS	Syncc8109_1000	Syncc8109_0996	ATPase; Belongs to the ClpA/ClpB family.	Undecaprenyl diphosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.	0.414
dacA	BioB	Syncc8109_0997	Syncc8109_0995	Hypothetical protein; Catalyzes the condensation of 2 ATP molecules into cyclic di- AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria.	Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family.	0.810
dacA	clpC	Syncc8109_0997	Syncc8109_1000	Hypothetical protein; Catalyzes the condensation of 2 ATP molecules into cyclic di- AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria.	ATPase; Belongs to the ClpA/ClpB family.	0.402
dacA	lysA	Syncc8109_0997	Syncc8109_0998	Hypothetical protein; Catalyzes the condensation of 2 ATP molecules into cyclic di- AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria.	Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.	0.791
dacA	rimI	Syncc8109_0997	Syncc8109_0999	Hypothetical protein; Catalyzes the condensation of 2 ATP molecules into cyclic di- AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria.	Ribosomal-protein-alanine acetyltransferase.	0.645
dacA	uppS	Syncc8109_0997	Syncc8109_0996	Hypothetical protein; Catalyzes the condensation of 2 ATP molecules into cyclic di- AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria.	Undecaprenyl diphosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.	0.835
guaA	lysA	Syncc8109_0052	Syncc8109_0998	GMP synthase; Catalyzes the synthesis of GMP from XMP.	Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.	0.565
guaA	rimI	Syncc8109_0052	Syncc8109_0999	GMP synthase; Catalyzes the synthesis of GMP from XMP.	Ribosomal-protein-alanine acetyltransferase.	0.459
guaA	uppS	Syncc8109_0052	Syncc8109_0996	GMP synthase; Catalyzes the synthesis of GMP from XMP.	Undecaprenyl diphosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.	0.500
lysA	BioB	Syncc8109_0998	Syncc8109_0995	Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.	Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family.	0.792
lysA	clpC	Syncc8109_0998	Syncc8109_1000	Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.	ATPase; Belongs to the ClpA/ClpB family.	0.429
lysA	dacA	Syncc8109_0998	Syncc8109_0997	Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.	Hypothetical protein; Catalyzes the condensation of 2 ATP molecules into cyclic di- AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria.	0.791
lysA	guaA	Syncc8109_0998	Syncc8109_0052	Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.	GMP synthase; Catalyzes the synthesis of GMP from XMP.	0.565