Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AHF63375.1Putative glycerol dehydrogenase. (314 aa)    
Predicted Functional Partners:
mhpC
Putative 2-hydroxy-6-oxohepta-2,4-dienoate hydrolase.
       0.811
AHF63377.1
Hypothetical protein.
       0.811
clpC
ATPase; Belongs to the ClpA/ClpB family.
  
    0.577
AHF64469.1
Sodium/bile acid cotransporter family.
     
 0.522
pykF
Pyruvate kinase; Belongs to the pyruvate kinase family.
      
 0.511
atp1
Putative ATP synthase protein 1.
  
   
 0.476
nit
Putative nitrilase.
      0.438
pyrF
Orotidine 5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily.
      
 0.423
rimI
Ribosomal-protein-alanine acetyltransferase.
       0.421
pyrE
Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).
      
 0.401
Your Current Organism:
Synechococcus sp. WH 8109
NCBI taxonomy Id: 166314
Other names: S. sp. WH 8109, Synechococcus sp. WH8109
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