STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mhpCPutative 2-hydroxy-6-oxohepta-2,4-dienoate hydrolase. (288 aa)    
Predicted Functional Partners:
AHF63375.1
Putative glycerol dehydrogenase.
       0.811
AHF63377.1
Hypothetical protein.
       0.811
AHF64429.1
Alpha/beta hydrolase superfamily protein.
  
     0.747
clpC
ATPase; Belongs to the ClpA/ClpB family.
  
  
 0.563
AHF64439.1
Putative dihydrolipoamide acetyltransferase component (E2) of pyruvate.
    
 0.482
AHF63006.1
Hypothetical protein.
    
  0.439
rimI
Ribosomal-protein-alanine acetyltransferase.
       0.421
acpP
Acyl carrier protein (ACP); Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 
 0.408
uppS
Undecaprenyl diphosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.
   
   0.401
Your Current Organism:
Synechococcus sp. WH 8109
NCBI taxonomy Id: 166314
Other names: S. sp. WH 8109, Synechococcus sp. WH8109
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