STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
phoRHistidine kinase. (376 aa)    
Predicted Functional Partners:
phoB
Two component transcriptional regulator, winged helix family.
 0.999
rpaA
Two component transcriptional regulator, winged helix family.
 
 
 0.887
AHF62552.1
Two component transcriptional regulator, winged helix family.
 
 
 0.882
rpaB
Two component transcriptional regulator, winged helix family.
 
 
 0.879
AHF63338.1
Two component transcriptional regulator, winged helix family.
  
 
 0.864
AHF64439.1
Putative dihydrolipoamide acetyltransferase component (E2) of pyruvate.
    
 0.839
AHF64845.1
Two component transcriptional regulator, LuxR family.
 
 
 0.822
rsuA
Pseudouridine synthase, Rsu; Belongs to the pseudouridine synthase RsuA family.
       0.801
AHF64179.1
Two component transcriptional regulator, winged helix family.
  
 
 0.782
AHF63386.1
Hypothetical protein.
       0.775
Your Current Organism:
Synechococcus sp. WH 8109
NCBI taxonomy Id: 166314
Other names: S. sp. WH 8109, Synechococcus sp. WH8109
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.