STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHF63389.1Cell envelope-related function transcriptional attenuator common domain protein. (291 aa)    
Predicted Functional Partners:
AHF63619.1
Hypothetical protein.
 
     0.734
AHF62739.1
Hypothetical protein.
 
     0.582
AHF63388.1
Hypothetical protein.
       0.530
rffM
Glycosyl transferase, WecB/TagA/CpsF family; Belongs to the glycosyltransferase 26 family.
 
   
 0.507
AHF63192.1
HAD-superfamily phosphatase subfamily IIIA.
  
     0.481
malQ
4-alpha-glucanotransferase.
       0.467
AHF63411.1
Putative porin; Belongs to the OprB family.
  
     0.447
som
Putative porin; Belongs to the OprB family.
  
     0.425
som-2
Putative porin; Belongs to the OprB family.
  
     0.424
AHF62614.1
Hypothetical protein; Required for morphogenesis under gluconeogenic growth conditions; Belongs to the gluconeogenesis factor family.
  
     0.402
Your Current Organism:
Synechococcus sp. WH 8109
NCBI taxonomy Id: 166314
Other names: S. sp. WH 8109, Synechococcus sp. WH8109
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