Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AHF63392.1Hypothetical protein. (391 aa)    
Predicted Functional Partners:
AHF63148.1
Hypothetical protein.
  
     0.739
AHF62555.1
Hypothetical protein.
  
     0.664
AHF62930.1
Hypothetical protein.
  
     0.646
AHF63393.1
Hypothetical protein.
       0.645
AHF62744.1
Hypothetical protein.
 
     0.638
AHF63807.1
Hypothetical protein.
  
     0.619
rpcF
Phycobilin lyase beta subunit.
  
     0.601
AHF65046.1
Hypothetical protein.
  
     0.581
AHF62669.1
Hypothetical protein.
  
     0.576
kprS
Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.
       0.561
Your Current Organism:
Synechococcus sp. WH 8109
NCBI taxonomy Id: 166314
Other names: S. sp. WH 8109, Synechococcus sp. WH8109
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