Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AHF63397.1ABC transporter, ATP binding domain, possibly Mn transport. (223 aa)    
Predicted Functional Partners:
AHF63396.1
ABC transporter component, possibly Mn transport.
 
 0.993
AHF63546.1
ABC transporter component, possibly Mn transport.
 
 0.978
AHF63543.1
ABC transporter, substrate binding protein, possibly Mn; Belongs to the bacterial solute-binding protein 9 family.
 
  
 0.893
AHF63549.1
ATPase.
  
  
 
0.813
futC
ATPase; Belongs to the ABC transporter superfamily.
  
 
 
0.810
drrA
ATPase.
  
 
 
0.785
AHF64457.1
Putative cobalt transport protein.
     
 0.775
AHF64395.1
ABC transporter, substrate binding protein.
     
 0.767
drrB
Putative multidrug efflux ABC transporter.
    
  0.762
hisM
Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine.
     
 0.762
Your Current Organism:
Synechococcus sp. WH 8109
NCBI taxonomy Id: 166314
Other names: S. sp. WH 8109, Synechococcus sp. WH8109
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