STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AHF63445.1Gamma-glutamyltransferase. (607 aa)    
Predicted Functional Partners:
gshB
Glutathione synthetase; Belongs to the prokaryotic GSH synthase family.
     
 0.935
AHF62538.1
Glutathione peroxidase; Belongs to the glutathione peroxidase family.
     
 0.934
oplaH
5-oxoprolinase (ATP-hydrolyzing).
 
  
 0.930
pepA
Leucyl aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides.
  
  
 0.930
gshR
Putative glutathione reductase (NADPH).
  
  
 0.919
AHF63365.1
Glutathione S-transferase domain protein.
  
  
 0.917
gst
Putative glutathione S-transferase.
     
 0.903
AHF64066.1
Hypothetical protein.
     
 0.903
AHF64755.1
Putative glutathione S-transferase.
     
 0.903
pepN
Peptidase M, neutral zinc metallopeptidase, zinc-binding site.
     
 0.900
Your Current Organism:
Synechococcus sp. WH 8109
NCBI taxonomy Id: 166314
Other names: S. sp. WH 8109, Synechococcus sp. WH8109
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