Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
hpnBPutative glycosyltransferase family 2. (397 aa)    
Predicted Functional Partners:
AHF63509.1
Hypothetical protein.
       0.671
AHF63943.1
Hypothetical protein.
  
 
 0.503
AHF64757.1
ATPases involved in chromosome partitioning-like protein.
  
 
 0.503
AHF63637.1
Hypothetical protein.
  
 
 0.487
AHF64456.1
Hypothetical protein.
  
 
 0.487
crtB
Phytoene synthase.
 
  
 0.487
AHF64764.1
Hypothetical protein.
     
 0.465
AHF63508.1
Hypothetical protein.
       0.455
AHF64784.1
Putative glycosyl transferase.
 
  
 0.425
AHF62699.1
Hypothetical protein.
  
  
 0.406
Your Current Organism:
Synechococcus sp. WH 8109
NCBI taxonomy Id: 166314
Other names: S. sp. WH 8109, Synechococcus sp. WH8109
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