STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHF63546.1ABC transporter component, possibly Mn transport. (274 aa)    
Predicted Functional Partners:
AHF63543.1
ABC transporter, substrate binding protein, possibly Mn; Belongs to the bacterial solute-binding protein 9 family.
 
 0.999
AHF63544.1
ATPase.
 
 0.998
AHF63397.1
ABC transporter, ATP binding domain, possibly Mn transport.
 
 0.978
hisM
Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine.
     
 0.933
AHF63806.1
ATPase.
     
 0.933
futC
ATPase; Belongs to the ABC transporter superfamily.
     
 0.932
AHF63768.1
ATPase.
     
 0.931
AHF63805.1
Putative permease.
     
 0.930
AHF62949.1
ATPase; Belongs to the ABC transporter superfamily.
    
  0.929
drrB
Putative multidrug efflux ABC transporter.
    
  0.929
Your Current Organism:
Synechococcus sp. WH 8109
NCBI taxonomy Id: 166314
Other names: S. sp. WH 8109, Synechococcus sp. WH8109
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.