Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
mutTNUDIX hydrolase family protein. (143 aa)    
Predicted Functional Partners:
AHF63551.1
Hypothetical protein.
 
     0.799
AHF63549.1
ATPase.
       0.773
AHF62744.1
Hypothetical protein.
  
   
 0.771
AHF62930.1
Hypothetical protein.
  
     0.758
AHF62654.1
Hypothetical protein.
  
     0.743
AHF63228.1
Hypothetical protein.
  
     0.742
AHF64805.1
Hypothetical protein.
  
     0.695
AHF63219.1
Hypothetical protein.
  
     0.665
AHF62712.1
Hypothetical protein.
  
     0.664
AHF64042.1
Hypothetical protein.
  
     0.659
Your Current Organism:
Synechococcus sp. WH 8109
NCBI taxonomy Id: 166314
Other names: S. sp. WH 8109, Synechococcus sp. WH8109
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