Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AHF63581.1Hypothetical protein. (117 aa)    
Predicted Functional Partners:
AHF64667.1
Hypothetical protein.
  
     0.759
psbO
Photosystem II manganese-stabilizing polypeptide.
  
     0.744
thf1
Thf1-like protein; May be involved in photosynthetic membrane biogenesis.
  
     0.733
AHF64815.1
Hypothetical protein.
  
     0.714
AHF63588.1
Hypothetical protein.
  
     0.711
AHF64323.1
Hypothetical protein.
  
     0.711
AHF63886.1
Hypothetical protein.
  
     0.709
AHF62609.1
Photosystem II stability/assembly factor-like protein; Unknown. The ortholog in A.thaliana is involved in photosystem II (PSII) assembly, but knockout of the corresponding gene in Synechoccus PCC 7002 has no effect on PSII activity.
  
     0.698
crtD
Carotene 7,8-desaturase.
  
     0.685
AHF65052.1
Hypothetical protein.
  
     0.684
Your Current Organism:
Synechococcus sp. WH 8109
NCBI taxonomy Id: 166314
Other names: S. sp. WH 8109, Synechococcus sp. WH8109
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