STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHF63586.1Hypothetical protein. (361 aa)    
Predicted Functional Partners:
AHF63585.1
Putative transcripton factor.
       0.777
AHF63696.1
Hypothetical protein.
  
     0.650
AHF63062.1
Hypothetical protein.
  
     0.636
AHF64311.1
Hypothetical protein.
  
     0.627
AHF64206.1
Hypothetical protein.
  
     0.601
rpaC
Putative regulator.
  
     0.573
AHF63582.1
Hypothetical protein.
       0.564
nadA
Quinolinate synthetase complex, A subunit; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate.
       0.564
AHF63584.1
Hypothetical protein.
       0.564
chpX
CO2 hydration protein.
  
     0.551
Your Current Organism:
Synechococcus sp. WH 8109
NCBI taxonomy Id: 166314
Other names: S. sp. WH 8109, Synechococcus sp. WH8109
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.