Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AHF63610.1Hypothetical protein. (165 aa)    
Predicted Functional Partners:
AHF63609.1
Hypothetical protein.
       0.807
AHF64206.1
Hypothetical protein.
  
     0.773
chpX
CO2 hydration protein.
  
     0.771
ftrV
Putative ferredoxin-thioredoxin reductase, variable chain.
  
     0.770
rpaC
Putative regulator.
  
     0.769
AHF63062.1
Hypothetical protein.
  
     0.765
AHF62796.1
Hypothetical protein.
  
     0.764
AHF63020.1
Hypothetical protein.
  
     0.762
AHF63807.1
Hypothetical protein.
  
     0.759
AHF63083.1
Hypothetical protein.
  
     0.753
Your Current Organism:
Synechococcus sp. WH 8109
NCBI taxonomy Id: 166314
Other names: S. sp. WH 8109, Synechococcus sp. WH8109
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