STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AHF63621.1ABC transporter, likely for trehalose/maltose, membrane component. (276 aa)    
Predicted Functional Partners:
AHF63622.1
ABC transporter for possibly for trehalose/maltose, membrane component.
 
 0.998
AHF63623.1
ABC transporter, likely sugar solute binding protein.
 
 0.998
AHF63620.1
ATPase; Belongs to the ABC transporter superfamily.
 
 0.995
lacF
Lactose transport system permease protein.
 
 0.953
AHF62949.1
ATPase; Belongs to the ABC transporter superfamily.
 
 0.946
AHF62551.1
Twin-arginine translocation pathway signal.
 
 0.908
ggpS
Glucosylglycerol-phosphate synthase.
     
 0.776
AHF63805.1
Putative permease.
     
  0.445
AHF63806.1
ATPase.
     
  0.443
AHF63625.1
Twin-arginine translocation pathway signal.
       0.416
Your Current Organism:
Synechococcus sp. WH 8109
NCBI taxonomy Id: 166314
Other names: S. sp. WH 8109, Synechococcus sp. WH8109
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.