STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AHF63623.1ABC transporter, likely sugar solute binding protein. (421 aa)    
Predicted Functional Partners:
AHF63620.1
ATPase; Belongs to the ABC transporter superfamily.
  
 0.999
AHF63622.1
ABC transporter for possibly for trehalose/maltose, membrane component.
 0.999
AHF63621.1
ABC transporter, likely for trehalose/maltose, membrane component.
 
 0.998
AHF62949.1
ATPase; Belongs to the ABC transporter superfamily.
 
 0.987
lacF
Lactose transport system permease protein.
 0.963
AHF63768.1
ATPase.
     
  0.929
AHF63805.1
Putative permease.
     
  0.929
AHF64395.1
ABC transporter, substrate binding protein.
     
 0.928
drrB
Putative multidrug efflux ABC transporter.
     
 0.924
AHF63806.1
ATPase.
     
  0.924
Your Current Organism:
Synechococcus sp. WH 8109
NCBI taxonomy Id: 166314
Other names: S. sp. WH 8109, Synechococcus sp. WH8109
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.