Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
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[Homology]
Score
AHF63625.1Twin-arginine translocation pathway signal. (155 aa)    
Predicted Functional Partners:
rpmB
LSU ribosomal protein L28P; Belongs to the bacterial ribosomal protein bL28 family.
  
    0.624
AHF64420.1
Thioredoxin reductase.
  
 
 0.505
htpG
ATP-binding region, ATPase-like protein.
       0.493
tmk
Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.
   
   0.467
fpaA
Flavoprotein.
     
 0.449
AHF63620.1
ATPase; Belongs to the ABC transporter superfamily.
       0.416
AHF63621.1
ABC transporter, likely for trehalose/maltose, membrane component.
       0.416
AHF63622.1
ABC transporter for possibly for trehalose/maltose, membrane component.
       0.416
AHF63623.1
ABC transporter, likely sugar solute binding protein.
       0.416
ggpS
Glucosylglycerol-phosphate synthase.
       0.416
Your Current Organism:
Synechococcus sp. WH 8109
NCBI taxonomy Id: 166314
Other names: S. sp. WH 8109, Synechococcus sp. WH8109
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