STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHF63647.1N-acetylmuramoyl-L-alanine amidase, family 2. (295 aa)    
Predicted Functional Partners:
AHF63645.1
Hypothetical protein.
 
     0.816
AHF63646.1
PDZ/DHR/GLGF protein.
       0.781
AHF63693.1
Hypothetical protein.
  
     0.759
AHF63230.1
Putative high light inducible protein.
  
     0.747
AHF64331.1
Phage integrase family.
  
     0.746
AHF63889.1
Hypothetical protein.
  
     0.725
nrdJ
Ribonucleotide reductase (class II).
  
     0.724
AHF63682.1
Hypothetical protein.
  
     0.722
AHF63024.1
Hypothetical protein.
  
     0.718
AHF64387.1
Hypothetical protein.
  
   
 0.713
Your Current Organism:
Synechococcus sp. WH 8109
NCBI taxonomy Id: 166314
Other names: S. sp. WH 8109, Synechococcus sp. WH8109
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.