STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHF63656.1Hypothetical protein. (238 aa)    
Predicted Functional Partners:
dapF
Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan.
       0.788
nifS
Putative cysteine desulfurase (class-V aminotransferase family).
       0.788
psbP
Putative photosystem II oxygen-evolving complex 23K protein PsbP.
  
     0.770
AHF65052.1
Hypothetical protein.
  
     0.769
AHF63072.1
Hypothetical protein.
  
     0.765
AHF63694.1
Hypothetical protein.
  
     0.765
AHF62729.1
Hypothetical protein.
  
     0.762
thf1
Thf1-like protein; May be involved in photosynthetic membrane biogenesis.
  
     0.761
AHF63022.1
Hypothetical protein.
  
     0.757
AHF63770.1
Hypothetical protein.
  
     0.751
Your Current Organism:
Synechococcus sp. WH 8109
NCBI taxonomy Id: 166314
Other names: S. sp. WH 8109, Synechococcus sp. WH8109
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.