STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CobNCobaltochelatase, CobN subunit. (1242 aa)    
Predicted Functional Partners:
chlD
Magnesium chelatase ATPase subunit D.
 
 0.954
cbiA
Cobyrinic acid a,c-diamide synthase.
 
 
 0.950
chlI
Magnesium chelatase ATPase subunit I; Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX.
 
 
 0.928
cobO
cob(I)alamin adenosyltransferase.
 
 
 0.922
AHF62681.1
cob(I)alamin adenosyltransferase.
  
 
 0.904
AHF62807.1
Hypothetical protein.
  
 
 0.904
cobL
Putative precorrin-6y methylase.
 
  
 0.857
cobJ
precorrin-3B C17-methyltransferase.
 
  
 0.804
cobI/cbiL
Precorrin-2 C20-methyltransferase; Belongs to the precorrin methyltransferase family.
 
   
 0.781
cobH
Putative precorrin-8X methylmutase CobH.
 
  
 0.777
Your Current Organism:
Synechococcus sp. WH 8109
NCBI taxonomy Id: 166314
Other names: S. sp. WH 8109, Synechococcus sp. WH8109
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