Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AHF63693.1Hypothetical protein. (388 aa)    
Predicted Functional Partners:
AHF63806.1
ATPase.
  
 
 0.798
AHF63805.1
Putative permease.
  
 
 0.793
metG
methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
       0.781
AHF64395.1
ABC transporter, substrate binding protein.
     
 0.767
psbM
Putative photosystem II reaction center M protein; One of the components of the core complex of photosystem II (PSII). PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. This subunit is found at the monomer-monomer interface.
  
     0.760
drrB
Putative multidrug efflux ABC transporter.
     
  0.759
futC
ATPase; Belongs to the ABC transporter superfamily.
     
  0.759
hisM
Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine.
     
  0.759
AHF63647.1
N-acetylmuramoyl-L-alanine amidase, family 2.
  
     0.759
AHF64457.1
Putative cobalt transport protein.
     
  0.755
Your Current Organism:
Synechococcus sp. WH 8109
NCBI taxonomy Id: 166314
Other names: S. sp. WH 8109, Synechococcus sp. WH8109
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