STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHF63695.1Hypothetical protein. (140 aa)    
Predicted Functional Partners:
psbX
Photosystem II PsbX protein; Involved in the binding and/or turnover of quinones at the Q(B) site of Photosystem II.
  
     0.754
psbM
Putative photosystem II reaction center M protein; One of the components of the core complex of photosystem II (PSII). PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. This subunit is found at the monomer-monomer interface.
  
     0.726
AHF64670.1
Hypothetical protein.
  
    0.720
AHF64191.1
Hypothetical protein.
  
     0.718
AHF63696.1
Hypothetical protein.
 
     0.717
AHF63693.1
Hypothetical protein.
  
     0.714
AHF64678.1
Hypothetical protein.
  
     0.712
AHF62625.1
Hypothetical protein.
  
     0.661
AHF63883.1
Hypothetical protein.
  
     0.661
AHF64671.1
Hypothetical protein.
  
     0.629
Your Current Organism:
Synechococcus sp. WH 8109
NCBI taxonomy Id: 166314
Other names: S. sp. WH 8109, Synechococcus sp. WH8109
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.