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Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
tpxThioredoxin peroxidase. (200 aa)    
Predicted Functional Partners:
AHF64420.1
Thioredoxin reductase.
  
 
 0.946
AHF63187.1
Hypothetical protein.
  
 0.614
AHF64058.1
Hypothetical protein.
  
 0.614
cugP
Putative sugar-phosphate nucleotidyl transferase; Catalyzes the formation of UDP-glucose, from UTP and glucose 1-phosphate.
    
  0.595
trxA_1
Thioredoxin; Belongs to the thioredoxin family.
  
 
 0.594
AHF62538.1
Glutathione peroxidase; Belongs to the glutathione peroxidase family.
   
 
 0.583
AHF63907.1
Putative bacterioferritin comigratory protein.
  
 
0.547
AHF63701.1
Hypothetical protein.
       0.536
sodC
Superoxide dismutase precursor (Cu-Zn).
   
 
 0.516
rub
Putative rubredoxin.
  
  
 0.499
Your Current Organism:
Synechococcus sp. WH 8109
NCBI taxonomy Id: 166314
Other names: S. sp. WH 8109, Synechococcus sp. WH8109
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