STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHF63760.1Hypothetical protein. (228 aa)    
Predicted Functional Partners:
AHF63757.1
Phosphonate-binding periplasmic protein.
     
 0.823
AHF63758.1
ATPase.
     
 0.823
AHF63759.1
Putative phosphonate ABC transporter.
       0.811
aspC
Aminotransferases class-I.
  
  
 0.724
AHF64191.1
Hypothetical protein.
  
     0.721
AHF63671.1
Hypothetical protein.
  
     0.715
AHF62972.1
Hypothetical protein.
  
     0.690
AHF62591.1
Hypothetical protein.
  
     0.675
AHF62593.1
Hypothetical protein.
  
   
 0.647
AHF63927.1
Hypothetical protein.
  
   
 0.633
Your Current Organism:
Synechococcus sp. WH 8109
NCBI taxonomy Id: 166314
Other names: S. sp. WH 8109, Synechococcus sp. WH8109
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.