STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHF63764.1Hypothetical protein. (239 aa)    
Predicted Functional Partners:
AHF63762.1
Hypothetical protein.
       0.773
AHF63763.1
Hypothetical protein.
       0.773
AHF62753.1
Glycosyl transferase, family 2.
 
      0.659
hemL
Glutamate-1-semialdehyde-2,1-aminomutase.
 
      0.649
AHF64667.1
Hypothetical protein.
  
     0.603
AHF63765.1
Hypothetical protein.
       0.550
AHF63886.1
Hypothetical protein.
  
     0.550
crtD
Carotene 7,8-desaturase.
  
     0.505
AHF63617.1
Hypothetical protein.
  
     0.500
AHF62609.1
Photosystem II stability/assembly factor-like protein; Unknown. The ortholog in A.thaliana is involved in photosystem II (PSII) assembly, but knockout of the corresponding gene in Synechoccus PCC 7002 has no effect on PSII activity.
  
     0.469
Your Current Organism:
Synechococcus sp. WH 8109
NCBI taxonomy Id: 166314
Other names: S. sp. WH 8109, Synechococcus sp. WH8109
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.