Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AHF63787.1Hypothetical protein. (252 aa)    
Predicted Functional Partners:
AHF63788.1
Hypothetical protein.
       0.543
AHF64398.1
Putative multidrug efflux transporter, MFS family.
  
  
 0.537
AHF63248.1
Hypothetical protein.
  
     0.532
AHF64482.1
Hypothetical protein.
  
     0.520
AHF63096.1
Hypothetical protein.
  
     0.519
AHF63786.1
Hypothetical protein.
  
    0.500
AHF63789.1
Hypothetical protein.
       0.500
AHF64191.1
Hypothetical protein.
  
     0.473
AHF63984.1
Membrane protein.
  
 
   0.472
uppS
Undecaprenyl diphosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.
   
 
  0.444
Your Current Organism:
Synechococcus sp. WH 8109
NCBI taxonomy Id: 166314
Other names: S. sp. WH 8109, Synechococcus sp. WH8109
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