Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AHF63807.1Hypothetical protein. (145 aa)    
Predicted Functional Partners:
AHF63806.1
ATPase.
  
 
 0.952
AHF63805.1
Putative permease.
  
 
 0.950
AHF62712.1
Hypothetical protein.
  
     0.774
AHF63645.1
Hypothetical protein.
  
     0.774
AHF62654.1
Hypothetical protein.
  
     0.773
AHF62744.1
Hypothetical protein.
  
    0.772
AHF62930.1
Hypothetical protein.
  
     0.772
AHF63336.1
Hypothetical protein.
  
     0.772
chpX
CO2 hydration protein.
  
     0.772
AHF64206.1
Hypothetical protein.
  
     0.771
Your Current Organism:
Synechococcus sp. WH 8109
NCBI taxonomy Id: 166314
Other names: S. sp. WH 8109, Synechococcus sp. WH8109
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