Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
typAGTP-binding protein TypA. (602 aa)    
Predicted Functional Partners:
AHF63808.1
Hypothetical protein.
       0.811
AHF63806.1
ATPase.
       0.682
AHF63811.1
Putative carboxypeptidase.
       0.668
glsF
Glutamate synthase (NADPH).
   
  
 0.667
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
  
  
 0.658
AHF63805.1
Putative permease.
       0.658
AHF63810.1
Putative peptidase U32 family protein.
  
    0.641
rimP
Hypothetical protein; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family.
  
  
 0.625
AHF63807.1
Hypothetical protein.
       0.622
ychF
Translation-associated GTPase; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner.
  
  
 0.584
Your Current Organism:
Synechococcus sp. WH 8109
NCBI taxonomy Id: 166314
Other names: S. sp. WH 8109, Synechococcus sp. WH8109
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