Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AHF63811.1Putative carboxypeptidase. (268 aa)    
Predicted Functional Partners:
ftsI
Peptidoglycan glycosyltransferase.
  
  
 0.914
dacB
D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase.
     
 0.906
AHF62480.1
Peptidoglycan glycosyltransferase.
     
 0.903
AHF64250.1
Penicillin-binding protein 1A.
     
 0.901
AHF63810.1
Putative peptidase U32 family protein.
       0.781
AHF63808.1
Hypothetical protein.
       0.668
typA
GTP-binding protein TypA.
       0.668
chlP
Geranylgeranyl reductase.
       0.633
AHF63806.1
ATPase.
       0.517
ccsA
Putative heme transporter; Required during biogenesis of c-type cytochromes (cytochrome c6 and cytochrome f) at the step of heme attachment.
 
     0.507
Your Current Organism:
Synechococcus sp. WH 8109
NCBI taxonomy Id: 166314
Other names: S. sp. WH 8109, Synechococcus sp. WH8109
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