STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
pcyAFerredoxin-dependent biliverdin reductase; Belongs to the HY2 family. (206 aa)    
Predicted Functional Partners:
ho1
Heme oxygenase (decyclizing).
 
  
 0.964
pebA
15,16 dihydrobiliverdin:ferredoxin oxidoreductase; Catalyzes the two-electron reduction of biliverdin IX-alpha at the C15 methine bridge; Belongs to the HY2 family.
  
  
0.942
AHF63824.1
DevC protein.
 
     0.844
AHF63823.1
ATPase.
       0.811
AHF63825.1
Putative ABC transporter component.
       0.811
AHF63588.1
Hypothetical protein.
  
     0.771
AHF64520.1
Hypothetical protein.
  
     0.771
AHF64748.1
Hypothetical protein.
  
     0.771
apcA
Allophycocyanin alpha chain.
  
   
 0.768
AHF63637.1
Hypothetical protein.
  
     0.759
Your Current Organism:
Synechococcus sp. WH 8109
NCBI taxonomy Id: 166314
Other names: S. sp. WH 8109, Synechococcus sp. WH8109
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.