STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHF63843.1Hypothetical protein. (239 aa)    
Predicted Functional Partners:
psb28
Putative photosystem II reaction center Psb28 protein; Belongs to the Psb28 family.
 
     0.875
AHF63618.1
Hypothetical protein.
  
     0.772
AHF63617.1
Hypothetical protein.
  
     0.770
AHF63245.1
Hypothetical protein.
  
     0.769
AHF63908.1
Hypothetical protein.
  
     0.764
psaL
Putative photosystem I reaction center subunit XI (PsaL).
  
     0.762
AHF63927.1
Hypothetical protein.
  
     0.761
AHF64481.1
Putative 3Fe-4S ferredoxin.
  
     0.759
AHF63133.1
Hypothetical protein.
  
     0.756
crtQ
Carotene 7,8-desaturase; Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7'.
  
     0.751
Your Current Organism:
Synechococcus sp. WH 8109
NCBI taxonomy Id: 166314
Other names: S. sp. WH 8109, Synechococcus sp. WH8109
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.