STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHF63844.1Rhodanese-like protein. (344 aa)    
Predicted Functional Partners:
AHF62599.1
Selenide,water dikinase.
 
   
 0.855
psb28
Putative photosystem II reaction center Psb28 protein; Belongs to the Psb28 family.
       0.713
AHF63846.1
Hypothetical protein.
       0.708
AHF63847.1
Hypothetical protein.
       0.688
AHF63843.1
Hypothetical protein.
       0.600
AHF63757.1
Phosphonate-binding periplasmic protein.
 
     0.534
AHF63842.1
Putative anti-sigma regulatory factor (serine/threonine protein kinase).
       0.497
AHF63759.1
Putative phosphonate ABC transporter.
 
     0.469
Your Current Organism:
Synechococcus sp. WH 8109
NCBI taxonomy Id: 166314
Other names: S. sp. WH 8109, Synechococcus sp. WH8109
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.