Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AHF63074.1 | mrnC | Syncc8109_0690 | Syncc8109_1530 | Secreted protein MPB70 precursor-like protein. | Hypothetical protein; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family. | 0.647 |
| AHF63074.1 | rpl10 | Syncc8109_0690 | Syncc8109_2578 | Secreted protein MPB70 precursor-like protein. | 50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. | 0.804 |
| AHF63074.1 | rpl3 | Syncc8109_0690 | Syncc8109_0380 | Secreted protein MPB70 precursor-like protein. | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 0.770 |
| AHF63074.1 | rpl33 | Syncc8109_0690 | Syncc8109_1324 | Secreted protein MPB70 precursor-like protein. | 50S ribosomal protein L33; Belongs to the bacterial ribosomal protein bL33 family. | 0.568 |
| AHF63890.1 | AHF63892.1 | Syncc8109_1529 | Syncc8109_1531 | RNA methyltransferase TrmH, group 3; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | Anti-anti-sigma regulatory factor, SpoIIAA; Belongs to the anti-sigma-factor antagonist family. | 0.550 |
| AHF63890.1 | carA | Syncc8109_1529 | Syncc8109_1532 | RNA methyltransferase TrmH, group 3; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | Carbamoyl-phosphate synthase, small subunit; Belongs to the CarA family. | 0.482 |
| AHF63890.1 | cysRS | Syncc8109_1529 | Syncc8109_2066 | RNA methyltransferase TrmH, group 3; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | cysteinyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.437 |
| AHF63890.1 | mrnC | Syncc8109_1529 | Syncc8109_1530 | RNA methyltransferase TrmH, group 3; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | Hypothetical protein; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family. | 0.704 |
| AHF63890.1 | rpl3 | Syncc8109_1529 | Syncc8109_0380 | RNA methyltransferase TrmH, group 3; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 0.694 |
| AHF63890.1 | trpD | Syncc8109_1529 | Syncc8109_1533 | RNA methyltransferase TrmH, group 3; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA). | 0.480 |
| AHF63892.1 | AHF63890.1 | Syncc8109_1531 | Syncc8109_1529 | Anti-anti-sigma regulatory factor, SpoIIAA; Belongs to the anti-sigma-factor antagonist family. | RNA methyltransferase TrmH, group 3; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | 0.550 |
| AHF63892.1 | carA | Syncc8109_1531 | Syncc8109_1532 | Anti-anti-sigma regulatory factor, SpoIIAA; Belongs to the anti-sigma-factor antagonist family. | Carbamoyl-phosphate synthase, small subunit; Belongs to the CarA family. | 0.681 |
| AHF63892.1 | mrnC | Syncc8109_1531 | Syncc8109_1530 | Anti-anti-sigma regulatory factor, SpoIIAA; Belongs to the anti-sigma-factor antagonist family. | Hypothetical protein; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family. | 0.800 |
| AHF63892.1 | trpD | Syncc8109_1531 | Syncc8109_1533 | Anti-anti-sigma regulatory factor, SpoIIAA; Belongs to the anti-sigma-factor antagonist family. | Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA). | 0.681 |
| carA | AHF63890.1 | Syncc8109_1532 | Syncc8109_1529 | Carbamoyl-phosphate synthase, small subunit; Belongs to the CarA family. | RNA methyltransferase TrmH, group 3; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | 0.482 |
| carA | AHF63892.1 | Syncc8109_1532 | Syncc8109_1531 | Carbamoyl-phosphate synthase, small subunit; Belongs to the CarA family. | Anti-anti-sigma regulatory factor, SpoIIAA; Belongs to the anti-sigma-factor antagonist family. | 0.681 |
| carA | mrnC | Syncc8109_1532 | Syncc8109_1530 | Carbamoyl-phosphate synthase, small subunit; Belongs to the CarA family. | Hypothetical protein; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family. | 0.695 |
| carA | trpD | Syncc8109_1532 | Syncc8109_1533 | Carbamoyl-phosphate synthase, small subunit; Belongs to the CarA family. | Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA). | 0.801 |
| cysRS | AHF63890.1 | Syncc8109_2066 | Syncc8109_1529 | cysteinyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | RNA methyltransferase TrmH, group 3; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | 0.437 |
| cysRS | mrnC | Syncc8109_2066 | Syncc8109_1530 | cysteinyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | Hypothetical protein; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family. | 0.865 |
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