STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHF63892.1Anti-anti-sigma regulatory factor, SpoIIAA; Belongs to the anti-sigma-factor antagonist family. (129 aa)    
Predicted Functional Partners:
AHF63842.1
Putative anti-sigma regulatory factor (serine/threonine protein kinase).
  
 
 0.992
AHF63682.1
Hypothetical protein.
  
    0.959
AHF62439.1
Serine phosphatase.
 
 
 0.943
AHF62615.1
ATPase.
   
   0.943
AHF62616.1
Putative ABC transporter.
  
   0.907
AHF64513.1
Hypothetical protein; Belongs to the MlaE permease family.
   
   0.905
mrnC
Hypothetical protein; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family.
       0.800
rpaC
Putative regulator.
 
     0.798
rpcE
Phycobilin lyase alpha subunit.
 
     0.769
apcA
Allophycocyanin alpha chain.
  
     0.747
Your Current Organism:
Synechococcus sp. WH 8109
NCBI taxonomy Id: 166314
Other names: S. sp. WH 8109, Synechococcus sp. WH8109
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.