STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
rpaCPutative regulator. (87 aa)    
Predicted Functional Partners:
AHF63892.1
Anti-anti-sigma regulatory factor, SpoIIAA; Belongs to the anti-sigma-factor antagonist family.
 
     0.798
AHF62796.1
Hypothetical protein.
  
     0.774
AHF63020.1
Hypothetical protein.
  
     0.774
AHF64206.1
Hypothetical protein.
  
     0.774
chpX
CO2 hydration protein.
  
     0.774
AHF63645.1
Hypothetical protein.
  
     0.771
AHF63495.1
Hypothetical protein.
  
     0.770
AHF63807.1
Hypothetical protein.
  
     0.770
ftrV
Putative ferredoxin-thioredoxin reductase, variable chain.
  
     0.770
AHF63260.1
Hypothetical protein.
  
     0.769
Your Current Organism:
Synechococcus sp. WH 8109
NCBI taxonomy Id: 166314
Other names: S. sp. WH 8109, Synechococcus sp. WH8109
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.