Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AHF63913.1N-acetylmuramoyl-L-alanine amidase. (356 aa)    
Predicted Functional Partners:
murI
Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis.
 
   
 0.853
AHF64343.1
Hypothetical protein.
   
   0.769
nit
Putative nitrilase.
  
    0.738
AHF63911.1
Trans-hexaprenyltranstransferase; Belongs to the FPP/GGPP synthase family.
       0.713
comB
2-phosphosulfolactate phosphatase; Belongs to the ComB family.
       0.657
AHF63918.1
Hypothetical protein.
 
     0.578
cinA
Competence-damaged protein; Belongs to the CinA family.
 
     0.556
AHF63916.1
Carboxylyase-related protein; Belongs to the UbiD family.
       0.529
aroA
3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate.
       0.498
minD
Septum site-determining protein MinD.
  
     0.429
Your Current Organism:
Synechococcus sp. WH 8109
NCBI taxonomy Id: 166314
Other names: S. sp. WH 8109, Synechococcus sp. WH8109
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