STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHF63927.1Hypothetical protein. (397 aa)    
Predicted Functional Partners:
AHF62591.1
Hypothetical protein.
  
     0.764
AHF63843.1
Hypothetical protein.
  
     0.761
AHF63585.1
Putative transcripton factor.
  
 
 
 0.740
AHF62676.1
Hypothetical protein.
  
     0.711
AHF64813.1
Hypothetical protein.
  
     0.706
AHF64754.1
Hypothetical protein.
  
     0.690
psbO
Photosystem II manganese-stabilizing polypeptide.
  
 
 
 0.689
AHF63928.1
Chromate transporter.
       0.686
AHF64344.1
Hypothetical protein.
  
     0.684
AHF63929.1
Putative arsenite transporter, ACR3 family.
  
    0.667
Your Current Organism:
Synechococcus sp. WH 8109
NCBI taxonomy Id: 166314
Other names: S. sp. WH 8109, Synechococcus sp. WH8109
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.