STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHF63996.1Putative transcriptional regulator. (144 aa)    
Predicted Functional Partners:
AHF63994.1
Hypothetical protein.
       0.752
AHF63995.1
Hypothetical protein.
       0.752
AHF63997.1
Hypothetical protein.
       0.701
AHF63993.1
Hypothetical protein.
       0.592
AHF64943.1
Hypothetical protein.
  
     0.537
AHF63998.1
Hypothetical protein.
       0.526
dnaQ
Putative DNA polymerase III, epsilon subunit.
  
     0.522
AHF64227.1
Hypothetical protein.
  
     0.475
AHF63422.1
HTH of cAMP family transcriptional regulator.
  
     0.472
AHF64200.1
Hypothetical protein.
  
     0.452
Your Current Organism:
Synechococcus sp. WH 8109
NCBI taxonomy Id: 166314
Other names: S. sp. WH 8109, Synechococcus sp. WH8109
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.